Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | E0E99_07795 | Not Available | Negative | 1599623 - 1600261 | 23466.4 |
| autotransporter assembly complex protein tama | E0E99_07800 | Not Available | Positive | 1600474 - 1602207 | 64744.6 |
| autotransporter assembly complex protein tamb | E0E99_07805 | Not Available | Positive | 1602204 - 1605980 | 136266.0 |
| gamma-glutamylcyclotransferase | E0E99_07810 | Not Available | Positive | 1605983 - 1606327 | 12950.3 |
| inorganic diphosphatase | E0E99_07815 | Not Available | Negative | 1606432 - 1606959 | 19539.3 |
| abc transporter substrate-binding protein | E0E99_07820 | Not Available | Positive | 1607269 - 1608225 | 34258.5 |
| sugar abc transporter atp-binding protein | E0E99_07825 | Not Available | Positive | 1608328 - 1609830 | 55165.4 |
| abc transporter permease | E0E99_07830 | Not Available | Positive | 1609844 - 1610866 | 35498.0 |
| sugar abc transporter permease yjff | E0E99_07835 | Not Available | Positive | 1610853 - 1611854 | 35139.1 |
| hamp domain-containing protein | E0E99_07840 | Not Available | Positive | 1611958 - 1613070 | 39792.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

