Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase cysq | E0E99_07735 | Not Available | Positive | 1587699 - 1588439 | 27249.6 |
| ytfj family protein | E0E99_07740 | Not Available | Negative | 1588429 - 1588986 | 20580.8 |
| duf1107 domain-containing protein | E0E99_07750 | Not Available | Positive | 1589315 - 1589521 | 8088.21 |
| hlyc/corc family transporter | E0E99_07755 | Not Available | Negative | 1589588 - 1590928 | 49738.6 |
| mfs transporter | E0E99_07765 | Not Available | Negative | 1592290 - 1593834 | 57841.9 |
| gfo/idh/moca family oxidoreductase | E0E99_07770 | Not Available | Negative | 1593916 - 1594938 | 37617.9 |
| gfo/idh/moca family oxidoreductase | E0E99_07775 | Not Available | Negative | 1594950 - 1596017 | 39294.8 |
| gfo/idh/moca family oxidoreductase | E0E99_07780 | Not Available | Negative | 1596014 - 1597198 | 43259.4 |
| gfo/idh/moca family oxidoreductase | E0E99_07785 | Not Available | Negative | 1597215 - 1598369 | 43305.5 |
| laci family transcriptional regulator | E0E99_07790 | Not Available | Positive | 1598560 - 1599615 | 38805.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

