Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_07685 | Not Available | Negative | 1576385 - 1577035 | 23626.0 |
| peptidylprolyl isomerase | E0E99_07690 | Not Available | Positive | 1577216 - 1577875 | 23669.3 |
| d-serine/d-alanine/glycine transporter | E0E99_07695 | Not Available | Positive | 1578184 - 1579593 | 51606.6 |
| iron-sulfur cluster repair protein ytfe | E0E99_07700 | Not Available | Negative | 1579677 - 1580339 | 24930.2 |
| hamp domain-containing protein | E0E99_07705 | Not Available | Positive | 1580585 - 1582138 | 55416.8 |
| dmt family transporter | E0E99_07710 | Not Available | Negative | 1582202 - 1583167 | 35014.3 |
| arac family transcriptional regulator | E0E99_07715 | Not Available | Negative | 1583244 - 1584068 | 31765.9 |
| sdr family oxidoreductase | E0E99_07720 | Not Available | Negative | 1584150 - 1584998 | 29167.5 |
| transcriptional regulator | E0E99_07725 | Not Available | Positive | 1585089 - 1585469 | 14114.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | E0E99_07730 | Not Available | Negative | 1585567 - 1587510 | 70741.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

