Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | E0E99_07635 | Not Available | Positive | 1570020 - 1570670 | 23595.4 |
| l-ribulose-5-phosphate 3-epimerase | E0E99_07640 | Not Available | Positive | 1570680 - 1571534 | 32018.5 |
| l-ribulose-5-phosphate 4-epimerase | E0E99_07645 | Not Available | Positive | 1571534 - 1572220 | 25422.2 |
| duf1471 domain-containing protein | E0E99_07650 | Not Available | Negative | 1572353 - 1572628 | 9972.71 |
| hypothetical protein | E0E99_07655 | Not Available | Positive | 1572927 - 1573691 | 27431.5 |
| 30s ribosomal protein s6 | E0E99_07660 | Not Available | Positive | 1573850 - 1574245 | 15160.8 |
| primosomal replication protein n | E0E99_07665 | Not Available | Positive | 1574252 - 1574566 | 11329.7 |
| 30s ribosomal protein s18 | E0E99_07670 | Not Available | Positive | 1574571 - 1574798 | 8986.94 |
| 50s ribosomal protein l9 | E0E99_07675 | Not Available | Positive | 1574840 - 1575289 | 15774.9 |
| dmt family transporter | E0E99_07680 | Not Available | Positive | 1575432 - 1576355 | 33159.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

