Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1294 domain-containing protein | E0E99_07435 | Not Available | Positive | 1533457 - 1533801 | 12861.2 |
| mbl fold metallo-hydrolase | E0E99_07440 | Not Available | Negative | 1533828 - 1534619 | 29476.0 |
| aph(6) family putative aminoglycoside o-phosphotransferase | E0E99_07445 | Not Available | Positive | 1534810 - 1535652 | 30703.7 |
| hoxn/hupn/nixa family nickel/cobalt transporter | E0E99_07450 | Not Available | Positive | 1535768 - 1536796 | 37439.1 |
| l-cystine transporter | E0E99_07455 | Not Available | Negative | 1536849 - 1538189 | 47010.1 |
| two-component system response regulator rsta | E0E99_07460 | Not Available | Negative | 1538435 - 1539169 | 27326.1 |
| glpm family protein | E0E99_07465 | Not Available | Positive | 1539297 - 1539632 | 12397.9 |
| dihydromonapterin reductase | E0E99_07470 | Not Available | Negative | 1539629 - 1540351 | 26139.5 |
| amino acid permease | E0E99_07475 | Not Available | Negative | 1540388 - 1541770 | 49452.5 |
| duf1471 domain-containing protein | E0E99_07480 | Not Available | Negative | 1542016 - 1542960 | 33723.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

