Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | E0E99_07385 | Not Available | Negative | 1519909 - 1521081 | 43835.0 |
| pts maltose transporter subunit iicb | E0E99_07390 | Not Available | Negative | 1521092 - 1522684 | 56678.7 |
| mal regulon transcriptional regulator mali | E0E99_07395 | Not Available | Positive | 1522854 - 1523882 | 36618.9 |
| duf945 domain-containing protein | E0E99_07400 | Not Available | Negative | 1523930 - 1525438 | 54362.9 |
| mannose-6-phosphate isomerase | E0E99_07405 | Not Available | Negative | 1525545 - 1526720 | 42451.8 |
| fumarate hydratase | E0E99_07410 | Not Available | Positive | 1526983 - 1528629 | 60276.8 |
| class ii fumarate hydratase | E0E99_07415 | Not Available | Positive | 1528771 - 1530174 | 50648.1 |
| dna replication terminus site-binding protein | E0E99_07420 | Not Available | Negative | 1530171 - 1531100 | 35715.2 |
| two-component system sensor histidine kinase rstb | E0E99_07425 | Not Available | Negative | 1531174 - 1532475 | 49249.9 |
| hypothetical protein | E0E99_07430 | Not Available | Negative | 1532704 - 1533222 | 19519.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

