Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein slyb | E0E99_07280 | Not Available | Negative | 1501762 - 1502229 | 15513.7 |
| anhydro-n-acetylmuramic acid kinase | E0E99_07285 | Not Available | Positive | 1502504 - 1503625 | 40083.5 |
| c-type lysozyme inhibitor | E0E99_07290 | Not Available | Positive | 1503713 - 1504042 | 12531.2 |
| pyridoxamine 5'-phosphate oxidase | E0E99_07295 | Not Available | Positive | 1504102 - 1504758 | 25440.5 |
| tyrosine--trna ligase | E0E99_07300 | Not Available | Positive | 1504885 - 1506159 | 47359.2 |
| pyridoxal kinase pdxy | E0E99_07305 | Not Available | Positive | 1506224 - 1507084 | 31070.6 |
| glutathione transferase gsta | E0E99_07310 | Not Available | Negative | 1507168 - 1507773 | 22509.2 |
| dipeptide/tripeptide permease dtpa | E0E99_07315 | Not Available | Negative | 1507878 - 1509383 | 54420.9 |
| endonuclease iii | E0E99_07325 | Not Available | Negative | 1509993 - 1510628 | 23535.6 |
| electron transport complex subunit e | E0E99_07330 | Not Available | Negative | 1510625 - 1511320 | 24365.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

