Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | E0E99_07230 | Not Available | Negative | 1493816 - 1494223 | 14907.6 |
| alkene reductase | E0E99_07235 | Not Available | Negative | 1494321 - 1495418 | 39413.5 |
| tetr/acrr family transcriptional regulator | E0E99_07240 | Not Available | Negative | 1495473 - 1496072 | 22124.7 |
| duf1289 domain-containing protein | E0E99_07245 | Not Available | Positive | 1496175 - 1496414 | 9426.3 |
| aldo/keto reductase family oxidoreductase | E0E99_07250 | Not Available | Positive | 1496464 - 1497360 | 33435.4 |
| superoxide dismutase | E0E99_07255 | Not Available | Positive | 1497442 - 1497966 | 17804.5 |
| fusc family protein | E0E99_07260 | Not Available | Negative | 1497967 - 1499982 | 75463.5 |
| hlyd family secretion protein | E0E99_07265 | Not Available | Negative | 1499979 - 1500878 | 33122.5 |
| duf1656 domain-containing protein | E0E99_07270 | Not Available | Negative | 1500845 - 1501081 | 9005.54 |
| transcriptional regulator slya | E0E99_07275 | Not Available | Positive | 1501274 - 1501714 | 16571.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

