Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclopropane fatty acyl phospholipid synthase | E0E99_07180 | Not Available | Negative | 1484315 - 1485463 | 43859.3 |
| bcr/cfla family multidrug efflux mfs transporter | E0E99_07185 | Not Available | Negative | 1485754 - 1486959 | 43137.5 |
| lysr family transcriptional regulator | E0E99_07190 | Not Available | Positive | 1487073 - 1488005 | 35127.7 |
| hth-type transcriptional repressor purr | E0E99_07195 | Not Available | Negative | 1488002 - 1489027 | 38106.8 |
| ynhf family membrane protein | E0E99_07200 | Not Available | Positive | 1489325 - 1489414 | 2955.79 |
| mfs transporter | E0E99_07205 | Not Available | Positive | 1489590 - 1490759 | 40183.5 |
| superoxide dismutase | E0E99_07210 | Not Available | Negative | 1490798 - 1491379 | 21261.8 |
| peptidoglycan endopeptidase | E0E99_07215 | Not Available | Negative | 1491507 - 1492337 | 30533.8 |
| grx4 family monothiol glutaredoxin | E0E99_07220 | Not Available | Positive | 1492672 - 1493019 | 12923.5 |
| ribonuclease t | E0E99_07225 | Not Available | Negative | 1493073 - 1493720 | 23576.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

