Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | E0E99_07130 | Not Available | Negative | 1474762 - 1476726 | 73902.2 |
| oxidoreductase | E0E99_07135 | Not Available | Negative | 1476744 - 1477238 | 18280.2 |
| transcriptional regulator | E0E99_07140 | Not Available | Negative | 1477648 - 1478289 | 23485.9 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | E0E99_07145 | Not Available | Negative | 1478417 - 1479385 | 34596.5 |
| rida family protein | E0E99_07150 | Not Available | Negative | 1479413 - 1479808 | 14053.5 |
| monooxygenase | E0E99_07155 | Not Available | Negative | 1480031 - 1480339 | 11662.8 |
| phzf family phenazine biosynthesis protein | E0E99_07160 | Not Available | Negative | 1480376 - 1481167 | 29348.2 |
| rlua family pseudouridine synthase | E0E99_07165 | Not Available | Positive | 1481297 - 1481995 | 25941.7 |
| multidrug efflux mate transporter mdtk | E0E99_07170 | Not Available | Negative | 1482035 - 1483408 | 49443.0 |
| riboflavin synthase | E0E99_07175 | Not Available | Positive | 1483626 - 1484273 | 23475.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

