Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | E0E99_07030 | Not Available | Positive | 1453602 - 1454111 | 19317.8 |
| amino acid abc transporter permease | E0E99_07035 | Not Available | Positive | 1454121 - 1455047 | 34215.7 |
| amino acid abc transporter atp-binding protein | E0E99_07040 | Not Available | Positive | 1455031 - 1455804 | 28301.1 |
| alcohol dehydrogenase | E0E99_07045 | Not Available | Negative | 1455841 - 1456830 | 35810.1 |
| lysr family transcriptional regulator | E0E99_07050 | Not Available | Negative | 1456929 - 1457849 | 34383.5 |
| glutathione s-transferase family protein | E0E99_07055 | Not Available | Positive | 1457962 - 1458579 | 23398.3 |
| mfs transporter | E0E99_07060 | Not Available | Negative | 1458649 - 1459959 | 47875.9 |
| l-talarate/galactarate dehydratase | E0E99_07065 | Not Available | Negative | 1460034 - 1461230 | 43961.7 |
| laci family dna-binding transcriptional regulator | E0E99_07070 | Not Available | Positive | 1461499 - 1462554 | 38102.1 |
| tautomerase ppta | E0E99_07075 | Not Available | Positive | 1462589 - 1462816 | 8504.21 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

