Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | E0E99_06980 | Not Available | Positive | 1442023 - 1442598 | 21467.8 |
| nadp-dependent oxidoreductase | E0E99_06985 | Not Available | Positive | 1442657 - 1443691 | 37437.1 |
| ynce family protein | E0E99_06990 | Not Available | Positive | 1443955 - 1445016 | 38407.8 |
| ygdi/ygdr family lipoprotein | E0E99_06995 | Not Available | Positive | 1445154 - 1445375 | 7897.45 |
| l-asparagine permease | E0E99_07000 | Not Available | Negative | 1445417 - 1446859 | 52145.9 |
| pas domain s-box protein | E0E99_07005 | Not Available | Negative | 1447139 - 1448680 | 56474.0 |
| msno8 family llm class oxidoreductase | E0E99_07010 | Not Available | Positive | 1449188 - 1450186 | 35947.8 |
| amidohydrolase | E0E99_07015 | Not Available | Positive | 1450186 - 1451307 | 40342.0 |
| llm class flavin-dependent oxidoreductase | E0E99_07020 | Not Available | Positive | 1451333 - 1452646 | 48394.5 |
| abc transporter substrate-binding protein | E0E99_07025 | Not Available | Positive | 1452659 - 1453591 | 32898.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

