Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_06930 | Not Available | Negative | 1431576 - 1431755 | 6587.46 |
| stress response membrane protein yncl | E0E99_06935 | Not Available | Negative | 1431895 - 1431990 | 3360.2 |
| ghot/ortt family toxin | E0E99_06940 | Not Available | Positive | 1432183 - 1432356 | 6608.51 |
| virulence effector srfc | E0E99_06945 | Not Available | Negative | 1432376 - 1434538 | 81337.7 |
| virulence factor srfb | E0E99_06950 | Not Available | Negative | 1434535 - 1437516 | 110948.0 |
| ssrab-activated protein | E0E99_06955 | Not Available | Negative | 1437521 - 1438828 | 47025.7 |
| abc transporter substrate-binding protein | E0E99_06960 | Not Available | Positive | 1439111 - 1440709 | 59374.2 |
| duf2526 family protein | E0E99_06965 | Not Available | Positive | 1440727 - 1440960 | 8851.42 |
| dmt family transporter | E0E99_06970 | Not Available | Negative | 1441021 - 1441470 | 15782.0 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | E0E99_06975 | Not Available | Negative | 1441467 - 1441985 | 19527.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

