Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative adenine-specific dna methyltransferase | E0E99_18360 | Not Available | Negative | 3723809 - 3724477 | 25020.5 |
| Putative transcriptional activator | E0E99_18365 | Not Available | Negative | 3724477 - 3724920 | 16205.5 |
| Hypothetical protein | E0E99_18370 | Not Available | Negative | 3724923 - 3725855 | 35450.8 |
| Putative antirepressor | E0E99_18375 | Not Available | Negative | 3725812 - 3726024 | 8526.98 |
| Hypothetical protein | E0E99_18380 | Not Available | Negative | 3726265 - 3726729 | 17531.0 |
| Prophage anti-repressor | E0E99_18385 | Not Available | Negative | 3726749 - 3726952 | 7158.69 |
| Prophage repressor | E0E99_18390 | Not Available | Positive | 3727052 - 3727708 | 23663.4 |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 3728455 - 3728531 | Not Available |
| Hypothetical protein | E0E99_18400 | Not Available | Positive | 3728895 - 3729215 | 12229.1 |
| Hypothetical protein | E0E99_18405 | Not Available | Positive | 3729263 - 3729658 | 15011.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

