Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | E0E99_06875 | Not Available | Negative | 1421184 - 1422587 | 51964.7 |
| type ii toxin-antitoxin system hica family toxin | E0E99_06880 | Not Available | Positive | 1422851 - 1423027 | 6802.28 |
| type ii toxin-antitoxin system hicb family antitoxin | E0E99_06885 | Not Available | Positive | 1423074 - 1423490 | 15157.2 |
| plp-dependent aminotransferase family protein | E0E99_06890 | Not Available | Positive | 1423583 - 1424992 | 52993.9 |
| extracellular solute-binding protein | E0E99_06895 | Not Available | Positive | 1425321 - 1426466 | 42148.2 |
| abc transporter atp-binding protein | E0E99_06900 | Not Available | Positive | 1426483 - 1427499 | 37194.9 |
| abc transporter permease | E0E99_06905 | Not Available | Positive | 1427500 - 1428444 | 34557.3 |
| abc transporter permease | E0E99_06910 | Not Available | Positive | 1428434 - 1429240 | 29042.0 |
| aminobutyraldehyde dehydrogenase | E0E99_06915 | Not Available | Positive | 1429262 - 1430689 | 51006.1 |
| hypothetical protein | E0E99_06925 | Not Available | Negative | 1431121 - 1431369 | 9327.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

