Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | E0E99_06765 | Not Available | Positive | 1399435 - 1400553 | 39315.4 |
| hamp domain-containing protein | E0E99_06775 | Not Available | Positive | 1400723 - 1402411 | 60304.9 |
| pca operon transcription factor pcaq | E0E99_06780 | Not Available | Negative | 1402452 - 1403375 | 33492.0 |
| manganese-dependent inorganic pyrophosphatase | E0E99_06785 | Not Available | Positive | 1403607 - 1404509 | 33248.9 |
| voc family protein | E0E99_06790 | Not Available | Positive | 1404630 - 1405973 | 50692.1 |
| glucan biosynthesis protein d | E0E99_06795 | Not Available | Positive | 1406167 - 1407822 | 62818.4 |
| duf465 domain-containing protein | E0E99_06800 | Not Available | Positive | 1407990 - 1408214 | 8770.53 |
| alanine racemase | E0E99_06805 | Not Available | Negative | 1408281 - 1409507 | 44414.6 |
| 50s ribosomal protein l7/l12-serine acetyltransferase | E0E99_06810 | Not Available | Positive | 1409726 - 1410271 | 20968.1 |
| hypothetical protein | E0E99_06815 | Not Available | Negative | 1410263 - 1411243 | 35729.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

