Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | E0E99_06710 | Not Available | Negative | 1389083 - 1390084 | 35947.1 |
| cytochrome b561 | E0E99_06715 | Not Available | Positive | 1390274 - 1390804 | 20109.7 |
| translesion error-prone dna polymerase v autoproteolytic subunit | E0E99_06720 | Not Available | Positive | 1390977 - 1391396 | 15102.3 |
| translesion error-prone dna polymerase v subunit umuc | E0E99_06725 | Not Available | Positive | 1391399 - 1392667 | 47615.4 |
| formate dehydrogenase-n subunit gamma | E0E99_06730 | Not Available | Negative | 1392790 - 1393443 | 25418.0 |
| formate dehydrogenase subunit beta | E0E99_06735 | Not Available | Negative | 1393436 - 1394323 | 32303.4 |
| formate dehydrogenase-n subunit alpha | E0E99_06740 | Not Available | Negative | 1394336 - 1397386 | 112786.0 |
| duf417 domain-containing protein | E0E99_06750 | Not Available | Positive | 1397910 - 1398512 | 22394.2 |
| duf302 domain-containing protein | E0E99_06755 | Not Available | Positive | 1398637 - 1399005 | 13691.5 |
| metal/formaldehyde-sensitive transcriptional repressor | E0E99_06760 | Not Available | Positive | 1399127 - 1399402 | 10158.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

