Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_06660 | Not Available | Positive | 1376882 - 1377094 | 7951.67 |
| ydbh family protein | E0E99_06665 | Not Available | Positive | 1377243 - 1379876 | 96881.4 |
| ynbe family lipoprotein | E0E99_06670 | Not Available | Positive | 1379879 - 1380070 | 6929.69 |
| duf1318 domain-containing protein | E0E99_06675 | Not Available | Positive | 1380078 - 1380404 | 11783.1 |
| hypothetical protein | E0E99_06680 | Not Available | Positive | 1380527 - 1380718 | 7958.74 |
| fmn-dependent nadh-azoreductase | E0E99_06685 | Not Available | Negative | 1380762 - 1381367 | 21662.9 |
| atp-dependent rna helicase hrpa | E0E99_06690 | Not Available | Positive | 1381569 - 1385471 | 149073.0 |
| ydcf family protein | E0E99_06695 | Not Available | Positive | 1385558 - 1386349 | 29111.4 |
| aldehyde dehydrogenase | E0E99_06700 | Not Available | Positive | 1386549 - 1387988 | 52284.0 |
| alpha/beta hydrolase | E0E99_06705 | Not Available | Negative | 1388030 - 1388956 | 33903.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

