Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0E99_06600 | Not Available | Positive | 1366434 - 1366649 | 8116.89 |
| o-acetylserine/cysteine exporter | E0E99_06610 | Not Available | Negative | 1367014 - 1367913 | 31958.8 |
| efflux mfs transporter ydee | E0E99_06615 | Not Available | Positive | 1368112 - 1369299 | 42407.0 |
| urea abc transporter atp-binding subunit urte | E0E99_06620 | Not Available | Negative | 1369343 - 1370041 | 25678.3 |
| urea abc transporter atp-binding protein urtd | E0E99_06625 | Not Available | Negative | 1370051 - 1370848 | 29429.5 |
| urea abc transporter permease subunit urtc | E0E99_06630 | Not Available | Negative | 1370848 - 1371921 | 38793.0 |
| urea abc transporter permease subunit urtb | E0E99_06635 | Not Available | Negative | 1371921 - 1373495 | 56803.5 |
| urea abc transporter substrate-binding protein | E0E99_06640 | Not Available | Negative | 1373539 - 1374810 | 45874.6 |
| hypothetical protein | E0E99_06645 | Not Available | Positive | 1375297 - 1375392 | 3551.41 |
| diguanylate cyclase | E0E99_06655 | Not Available | Negative | 1375676 - 1376602 | 35271.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

