Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | E0E99_06495 | Not Available | Positive | 1347421 - 1348764 | 47908.9 |
| molecular chaperone | E0E99_06500 | Not Available | Positive | 1348772 - 1349428 | 24038.7 |
| cadc family transcriptional regulator | E0E99_06505 | Not Available | Positive | 1349484 - 1350248 | 29510.4 |
| hypothetical protein | E0E99_06510 | Not Available | Positive | 1350358 - 1350705 | 13159.5 |
| n-acetyltransferase | E0E99_06520 | Not Available | Negative | 1352198 - 1352719 | 19595.6 |
| trans-aconitate 2-methyltransferase | E0E99_06525 | Not Available | Positive | 1352830 - 1353588 | 28957.1 |
| gfa family protein | E0E99_06530 | Not Available | Positive | 1353721 - 1354098 | 13647.7 |
| hypothetical protein | E0E99_06535 | Not Available | Negative | 1354095 - 1355009 | 34840.1 |
| tagaturonate reductase | E0E99_06540 | Not Available | Negative | 1355225 - 1356676 | 54638.2 |
| gnat family n-acetyltransferase | E0E99_06545 | Not Available | Negative | 1356783 - 1357310 | 19155.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

