Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | E0E99_06445 | Not Available | Negative | 1329979 - 1331304 | 49092.4 |
| type i secretion system permease/atpase | E0E99_06450 | Not Available | Negative | 1331307 - 1333046 | 62976.5 |
| heme peroxidase | E0E99_06455 | Not Available | Negative | 1333057 - 1338387 | 187583.0 |
| dha2 family efflux mfs transporter permease subunit | E0E99_06460 | Not Available | Negative | 1338836 - 1340233 | 49918.5 |
| hypothetical protein | E0E99_06465 | Not Available | Negative | 1340362 - 1341828 | 53716.1 |
| arac family transcriptional regulator | E0E99_06470 | Not Available | Negative | 1341986 - 1342819 | 31050.9 |
| hypothetical protein | E0E99_06475 | Not Available | Negative | 1342829 - 1343215 | 14742.7 |
| type 1 fimbrial protein | E0E99_06480 | Not Available | Positive | 1343678 - 1344232 | 18752.1 |
| molecular chaperone | E0E99_06485 | Not Available | Positive | 1344277 - 1344960 | 25228.4 |
| fimbrial biogenesis outer membrane usher protein | E0E99_06490 | Not Available | Positive | 1344947 - 1347424 | 90118.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

