Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | E0E99_06395 | Not Available | Negative | 1319973 - 1321535 | 57288.0 |
| d-alanyl-d-alanine dipeptidase | E0E99_06400 | Not Available | Negative | 1321551 - 1322138 | 21521.6 |
| murr/rpir family transcriptional regulator | E0E99_06405 | Not Available | Negative | 1322153 - 1323019 | 32376.7 |
| acid-activated periplasmic chaperone hdeb | E0E99_06410 | Not Available | Positive | 1323421 - 1323750 | 11967.2 |
| methyl-accepting chemotaxis protein | E0E99_06415 | Not Available | Positive | 1323906 - 1325849 | 69825.0 |
| xre family transcriptional regulator | E0E99_06420 | Not Available | Positive | 1326029 - 1326343 | 11450.9 |
| type ii toxin-antitoxin system hipa family toxin | E0E99_06425 | Not Available | Positive | 1326336 - 1327607 | 47364.4 |
| hypothetical protein | E0E99_06430 | Not Available | Positive | 1327662 - 1328180 | 19208.1 |
| glycoside hydrolase family 10 protein | E0E99_06435 | Not Available | Negative | 1328177 - 1329544 | 51461.1 |
| duf2132 domain-containing protein | E0E99_06440 | Not Available | Negative | 1329557 - 1329844 | 10906.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

