Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntp family permease | E0E99_06345 | Not Available | Negative | 1310122 - 1311513 | 48641.6 |
| 3-hydroxyacyl-coa dehydrogenase family protein | E0E99_06350 | Not Available | Negative | 1311554 - 1312477 | 33671.8 |
| acetyl-coa c-acetyltransferase | E0E99_06355 | Not Available | Negative | 1312467 - 1313672 | 41416.7 |
| coa transferase subunit b | E0E99_06360 | Not Available | Negative | 1313683 - 1314339 | 23166.5 |
| coa transferase subunit a | E0E99_06365 | Not Available | Negative | 1314342 - 1315049 | 25445.7 |
| lysr family transcriptional regulator | E0E99_06370 | Not Available | Positive | 1315192 - 1316082 | 32658.8 |
| atp-binding cassette domain-containing protein | E0E99_06375 | Not Available | Negative | 1316102 - 1317037 | 34859.4 |
| abc transporter atp-binding protein | E0E99_06380 | Not Available | Negative | 1317030 - 1318016 | 36049.9 |
| d,d-dipeptide abc transporter permease | E0E99_06385 | Not Available | Negative | 1318013 - 1318909 | 32022.9 |
| abc transporter permease | E0E99_06390 | Not Available | Negative | 1318906 - 1319928 | 37464.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

