Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | E0E99_06295 | Not Available | Positive | 1299185 - 1299772 | 21552.0 |
| formate dehydrogenase-n subunit alpha | E0E99_06300 | Not Available | Positive | 1299821 - 1302232 | 89720.6 |
| formate dehydrogenase subunit beta | E0E99_06305 | Not Available | Positive | 1302246 - 1303130 | 32347.5 |
| formate dehydrogenase-n subunit gamma | E0E99_06310 | Not Available | Positive | 1303123 - 1303779 | 25614.3 |
| inorganic diphosphatase | E0E99_06315 | Not Available | Positive | 1303909 - 1304511 | 22248.8 |
| abc-f family atp-binding cassette domain-containing protein | E0E99_06320 | Not Available | Negative | 1304591 - 1306306 | 63816.4 |
| nad-dependent malic enzyme | E0E99_06325 | Not Available | Negative | 1306616 - 1308313 | 63262.9 |
| stationary-phase-induced ribosome-associated protein | E0E99_06330 | Not Available | Negative | 1308493 - 1308633 | 5239.3 |
| osmc family peroxiredoxin | E0E99_06335 | Not Available | Positive | 1308861 - 1309292 | 15081.0 |
| 3-hydroxybutyrate dehydrogenase | E0E99_06340 | Not Available | Negative | 1309340 - 1310110 | 26964.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

