Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase subunit gamma | E0E99_06245 | Not Available | Negative | 1285465 - 1286145 | 25710.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | E0E99_06250 | Not Available | Negative | 1286142 - 1286837 | 25877.6 |
| nitrate reductase subunit beta | E0E99_06255 | Not Available | Negative | 1286837 - 1288381 | 58661.2 |
| nitrate reductase subunit alpha | E0E99_06260 | Not Available | Negative | 1288378 - 1292118 | 140342.0 |
| nark family nitrate/nitrite mfs transporter | E0E99_06265 | Not Available | Negative | 1292168 - 1293553 | 49552.7 |
| tetr family transcriptional regulator | E0E99_06270 | Not Available | Negative | 1293765 - 1294343 | 21487.8 |
| mfs transporter | E0E99_06275 | Not Available | Positive | 1294460 - 1295944 | 51792.2 |
| gfa family protein | E0E99_06280 | Not Available | Negative | 1295948 - 1296328 | 14472.2 |
| porin ompd | E0E99_06285 | Not Available | Negative | 1296472 - 1297554 | 39619.3 |
| drug/metabolite dmt transporter permease | E0E99_06290 | Not Available | Negative | 1298016 - 1298897 | 31457.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

