Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase rava | E0E99_06195 | Not Available | Negative | 1272947 - 1274443 | 56646.3 |
| low affinity potassium transporter kup | E0E99_06200 | Not Available | Positive | 1274773 - 1276641 | 69356.4 |
| d-ribose pyranase | E0E99_06205 | Not Available | Positive | 1276834 - 1277253 | 15344.5 |
| ribose abc transporter atp-binding protein rbsa | E0E99_06210 | Not Available | Positive | 1277261 - 1278766 | 55113.2 |
| ribose abc transporter permease | E0E99_06215 | Not Available | Positive | 1278772 - 1279737 | 33341.9 |
| ribose abc transporter substrate-binding protein rbsb | E0E99_06220 | Not Available | Positive | 1279762 - 1280652 | 30939.3 |
| ribokinase | E0E99_06225 | Not Available | Positive | 1280794 - 1281723 | 32047.1 |
| transcriptional regulator rbsr | E0E99_06230 | Not Available | Positive | 1281727 - 1282719 | 36613.2 |
| dha2 family efflux mfs transporter permease subunit | E0E99_06235 | Not Available | Negative | 1282685 - 1284112 | 51395.0 |
| fadr family transcriptional regulator | E0E99_06240 | Not Available | Negative | 1284114 - 1284818 | 26583.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

