Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | E0E99_06045 | Not Available | Positive | 1240642 - 1242288 | 61577.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E0E99_06050 | Not Available | Positive | 1242394 - 1243758 | 49138.6 |
| mfs transporter | E0E99_06055 | Not Available | Positive | 1243941 - 1245122 | 41831.6 |
| hth-type transcriptional regulator yidz | E0E99_06060 | Not Available | Positive | 1245091 - 1246050 | 36883.8 |
| hypothetical protein | E0E99_06065 | Not Available | Positive | 1246217 - 1246963 | 27622.1 |
| nad(p)h-dependent oxidoreductase | E0E99_06070 | Not Available | Positive | 1246994 - 1247560 | 20242.5 |
| ncs2 family permease | E0E99_06075 | Not Available | Negative | 1247615 - 1248952 | 46660.5 |
| 6-phosphogluconate phosphatase | E0E99_06080 | Not Available | Positive | 1249120 - 1249785 | 24603.6 |
| phosphate signaling complex protein phou | E0E99_06085 | Not Available | Negative | 1249870 - 1250595 | 27478.3 |
| phosphate abc transporter atp-binding protein pstb | E0E99_06090 | Not Available | Negative | 1250610 - 1251383 | 29000.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

