Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator dsdc | E0E99_05945 | Not Available | Negative | 1221195 - 1222121 | 34893.5 |
| d-serine transporter dsdx | E0E99_05950 | Not Available | Positive | 1222351 - 1223688 | 46935.8 |
| d-serine ammonia-lyase | E0E99_05955 | Not Available | Positive | 1223706 - 1225028 | 47491.6 |
| radical sam protein | E0E99_05960 | Not Available | Negative | 1225031 - 1225543 | 19608.7 |
| duf202 domain-containing protein | E0E99_05965 | Not Available | Negative | 1225558 - 1225920 | 13691.0 |
| duf202 domain-containing protein | E0E99_05970 | Not Available | Negative | 1225910 - 1226257 | 12759.0 |
| putative transporter | E0E99_05975 | Not Available | Negative | 1226443 - 1228104 | 58918.7 |
| heat shock chaperone ibpb | E0E99_05980 | Not Available | Negative | 1228229 - 1228657 | 16036.9 |
| heat shock chaperone ibpa | E0E99_05985 | Not Available | Negative | 1228750 - 1229163 | 15692.5 |
| ycek/yidq family lipoprotein | E0E99_05990 | Not Available | Positive | 1229465 - 1229800 | 12022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

