Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | E0E99_05895 | Not Available | Negative | 1211388 - 1212716 | 48562.6 |
| signal transduction histidine-protein kinase/phosphatase uhpb | E0E99_05900 | Not Available | Negative | 1212726 - 1214228 | 56119.9 |
| transcriptional regulator uhpa | E0E99_05905 | Not Available | Negative | 1214225 - 1214818 | 20931.7 |
| acetolactate synthase 1 small subunit | E0E99_05910 | Not Available | Negative | 1214973 - 1215263 | 11126.5 |
| acetolactate synthase large subunit | E0E99_05915 | Not Available | Negative | 1215267 - 1216955 | 60643.5 |
| ilvb operon leader peptide ivbl | E0E99_05920 | Not Available | Negative | 1217063 - 1217161 | 3263.17 |
| type i toxin-antitoxin system toxin tisb | E0E99_05925 | Not Available | Positive | 1217683 - 1217772 | 3195.29 |
| eama family transporter | E0E99_05930 | Not Available | Positive | 1217896 - 1218729 | 29191.7 |
| multidrug transporter emrd | E0E99_05935 | Not Available | Positive | 1218923 - 1220107 | 42087.3 |
| hypothetical protein | E0E99_05940 | Not Available | Negative | 1220034 - 1221116 | 39868.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

