Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | E0E99_05740 | Not Available | Positive | 1182234 - 1182992 | 26578.9 |
| Trna-gly | Not Available | Not Available | Positive | 1183072 - 1183145 | Not Available |
| duf3950 domain-containing protein | E0E99_05755 | Not Available | Negative | 1184000 - 1184167 | 6589.98 |
| type i addiction module toxin, syme family | E0E99_05760 | Not Available | Positive | 1184296 - 1184586 | 10728.7 |
| intestinal colonization autotransporter adhesin misl | E0E99_05765 | Not Available | Negative | 1184721 - 1187546 | 99821.0 |
| helix-turn-helix transcriptional regulator | E0E99_05770 | Not Available | Negative | 1187621 - 1188238 | 23717.9 |
| transcriptional regulator | E0E99_05775 | Not Available | Positive | 1188745 - 1189584 | 32047.6 |
| hypothetical protein | E0E99_05780 | Not Available | Positive | 1189584 - 1190048 | 17459.0 |
| c69 family dipeptidase | E0E99_05785 | Not Available | Positive | 1190391 - 1191887 | 55835.0 |
| lysr family transcriptional regulator | E0E99_05790 | Not Available | Negative | 1191924 - 1192826 | 33653.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

