Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01110 | E0E99_05690 | Not Available | Negative | 1172775 - 1173755 | Not Available |
| fad assembly factor sdhe | E0E99_05695 | Not Available | Positive | 1174012 - 1174278 | 10558.7 |
| hypothetical protein | E0E99_05700 | Not Available | Positive | 1174259 - 1174666 | 15986.9 |
| flavodoxin fldb | E0E99_05705 | Not Available | Negative | 1174711 - 1175232 | 19716.3 |
| site-specific tyrosine recombinase xerd | E0E99_05710 | Not Available | Positive | 1175346 - 1176242 | 34156.1 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | E0E99_05715 | Not Available | Positive | 1176266 - 1176979 | 25908.4 |
| single-stranded-dna-specific exonuclease recj | E0E99_05720 | Not Available | Positive | 1176985 - 1178718 | 63215.3 |
| peptide chain release factor 2 | E0E99_05725 | Not Available | Positive | 1178810 - 1179908 | 41197.0 |
| lysine--trna ligase | E0E99_05730 | Not Available | Positive | 1179918 - 1181435 | 57688.7 |
| isopentenyl-diphosphate delta-isomerase | E0E99_05735 | Not Available | Negative | 1181513 - 1182067 | 20753.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

