Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-6-methoxyphenyl hydroxylase | E0E99_05640 | Not Available | Positive | 1160827 - 1162005 | 42565.1 |
| fad-dependent 2-octaprenylphenol hydroxylase | E0E99_05645 | Not Available | Positive | 1162145 - 1163347 | 44099.1 |
| glycine cleavage system aminomethyltransferase gcvt | E0E99_05650 | Not Available | Positive | 1163800 - 1164894 | 40160.1 |
| glycine cleavage system protein gcvh | E0E99_05655 | Not Available | Positive | 1164920 - 1165309 | 13737.8 |
| aminomethyl-transferring glycine dehydrogenase | E0E99_05660 | Not Available | Positive | 1165441 - 1168314 | 104526.0 |
| sdr family oxidoreductase | E0E99_05665 | Not Available | Positive | 1168376 - 1169119 | 26060.2 |
| 6-phospho-beta-glucosidase | E0E99_05670 | Not Available | Negative | 1169213 - 1170646 | 55331.4 |
| murr/rpir family transcriptional regulator | E0E99_05675 | Not Available | Negative | 1170767 - 1171495 | 27277.9 |
| asch domain-containing protein | E0E99_05680 | Not Available | Positive | 1171548 - 1171859 | 11953.1 |
| hemolysin iii family protein | E0E99_05685 | Not Available | Positive | 1172022 - 1172681 | 23744.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

