Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail length tape measure protein | E0E99_18210 | Not Available | Negative | 3702565 - 3705090 | 89436.8 |
| Tail assembly chaperone | E0E99_18215 | Not Available | Negative | 3705358 - 3705735 | 13043.5 |
| Major tail subunit | E0E99_18220 | Not Available | Negative | 3705786 - 3706283 | 17490.1 |
| Gp11 | E0E99_18225 | Not Available | Negative | 3706336 - 3706704 | 13647.0 |
| Hypothetical protein | E0E99_18230 | Not Available | Negative | 3706701 - 3707186 | 17684.4 |
| Putative head-tail adaptor | E0E99_18235 | Not Available | Negative | 3707179 - 3707511 | 12455.8 |
| Hypothetical protein | E0E99_18240 | Not Available | Negative | 3707514 - 3707708 | 7049.37 |
| Hypothetical protein | E0E99_18245 | Not Available | Negative | 3707779 - 3708105 | 11972.5 |
| Putative prophage portal protein | E0E99_18250 | Not Available | Negative | 3708102 - 3708986 | 32495.2 |
| Putative portal protein | E0E99_18255 | Not Available | Negative | 3708983 - 3710335 | 49325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

