Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | E0E99_05235 | Not Available | Positive | 1082063 - 1082497 | 16087.3 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | E0E99_05240 | Not Available | Positive | 1082647 - 1086087 | 127433.0 |
| peptide deformylase | E0E99_05250 | Not Available | Negative | 1087133 - 1087585 | 16467.3 |
| outer membrane porin, oprd family | E0E99_05255 | Not Available | Negative | 1087762 - 1089129 | 49002.4 |
| duf1471 domain-containing protein | E0E99_05265 | Not Available | Negative | 1090539 - 1090751 | 7202.61 |
| atp-binding protein | E0E99_05270 | Not Available | Negative | 1091178 - 1091915 | 28079.9 |
| duf3732 domain-containing protein | E0E99_05295 | Not Available | Negative | 1095941 - 1097902 | 73508.5 |
| hypothetical protein | E0E99_05300 | Not Available | Negative | 1097899 - 1098387 | 18727.9 |
| hypothetical protein | E0E99_05305 | Not Available | Negative | 1098384 - 1099607 | 46832.3 |
| is110 family transposase | E0E99_05310 | Not Available | Negative | 1100176 - 1101198 | 38497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

