Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | E0E99_05135 | Not Available | Negative | 1053566 - 1054294 | 27014.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | E0E99_05140 | Not Available | Positive | 1054453 - 1057089 | 97062.8 |
| acetyl-coa c-acetyltransferase | E0E99_05145 | Not Available | Negative | 1057133 - 1058317 | 40481.2 |
| tigr00366 family protein | E0E99_05150 | Not Available | Negative | 1058348 - 1059670 | 47266.2 |
| coa transferase subunit b | E0E99_05155 | Not Available | Negative | 1059667 - 1060317 | 23024.2 |
| acetate coa-transferase subunit alpha | E0E99_05160 | Not Available | Negative | 1060320 - 1060979 | 23363.6 |
| acetoacetate metabolism transcriptional regulator atoc | E0E99_05165 | Not Available | Negative | 1061178 - 1062563 | 52266.4 |
| two-component system sensor histidine kinase atos | E0E99_05170 | Not Available | Negative | 1062560 - 1064398 | 67833.1 |
| two-component system sensor histidine kinase rcsc | E0E99_05175 | Not Available | Positive | 1064567 - 1067413 | 106333.0 |
| transcriptional regulator rcsb | E0E99_05180 | Not Available | Negative | 1067526 - 1068176 | 23719.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

