Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis signal transduction protein chev | E0E99_04985 | Not Available | Negative | 1021163 - 1022167 | 37155.1 |
| ribonuclease bn | E0E99_04990 | Not Available | Negative | 1022232 - 1023149 | 33023.6 |
| gnat family n-acetyltransferase | E0E99_04995 | Not Available | Positive | 1023217 - 1023678 | 17325.6 |
| stress response protein elab | E0E99_05000 | Not Available | Positive | 1023732 - 1024037 | 11531.6 |
| isochorismate synthase menf | E0E99_05005 | Not Available | Positive | 1024142 - 1025440 | 48673.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | E0E99_05010 | Not Available | Positive | 1025525 - 1027195 | 61378.5 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | E0E99_05015 | Not Available | Positive | 1027192 - 1027950 | 28092.4 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | E0E99_05020 | Not Available | Positive | 1027965 - 1028822 | 31577.8 |
| o-succinylbenzoate synthase | E0E99_05025 | Not Available | Positive | 1028822 - 1029784 | 35199.2 |
| o-succinylbenzoate--coa ligase | E0E99_05030 | Not Available | Positive | 1029781 - 1031205 | 51979.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

