Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpxp protease specificity-enhancing factor | E0E99_04680 | Not Available | Negative | 961261 - 961764 | 18361.4 |
| stringent starvation protein a | E0E99_04685 | Not Available | Negative | 961770 - 962408 | 24364.4 |
| hypothetical protein | E0E99_04690 | Not Available | Positive | 962523 - 962807 | 10859.0 |
| 30s ribosomal protein s9 | E0E99_04695 | Not Available | Negative | 962725 - 963117 | 14800.1 |
| 50s ribosomal protein l13 | E0E99_04700 | Not Available | Negative | 963133 - 963561 | 15962.4 |
| cell division protein zape | E0E99_04705 | Not Available | Negative | 963780 - 964907 | 42825.7 |
| duf1043 family protein | E0E99_04710 | Not Available | Positive | 965100 - 965498 | 14964.7 |
| serine endoprotease degq | E0E99_04715 | Not Available | Positive | 965667 - 967034 | 47424.2 |
| serine endoprotease degs | E0E99_04720 | Not Available | Positive | 967124 - 968191 | 37593.5 |
| malate dehydrogenase | E0E99_04725 | Not Available | Negative | 968248 - 969183 | 32170.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

