Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase small subunit | E0E99_04630 | Not Available | Positive | 949068 - 950486 | 52202.4 |
| duf1016 domain-containing protein | E0E99_04635 | Not Available | Positive | 950686 - 951768 | 41528.9 |
| cytosine permease | E0E99_04640 | Not Available | Positive | 951906 - 953156 | 43366.6 |
| cytosine deaminase | E0E99_04645 | Not Available | Positive | 953146 - 954426 | 47750.0 |
| yhch/yjgk/yial family protein | E0E99_04650 | Not Available | Negative | 954485 - 954952 | 17105.8 |
| rok family protein | E0E99_04655 | Not Available | Negative | 954955 - 955824 | 29590.7 |
| mfs transporter | E0E99_04660 | Not Available | Negative | 955931 - 957421 | 53772.7 |
| n-acetylneuraminate lyase | E0E99_04665 | Not Available | Negative | 957532 - 958425 | 32690.5 |
| transcriptional regulator nanr | E0E99_04670 | Not Available | Negative | 958685 - 959476 | 29839.4 |
| c4-dicarboxylate transporter dcuc | E0E99_04675 | Not Available | Positive | 959837 - 961204 | 48470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

