Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | E0E99_04580 | Not Available | Positive | 935222 - 936655 | 53935.8 |
| ribosome hibernation promoting factor | E0E99_04585 | Not Available | Positive | 936678 - 936965 | 10806.0 |
| pts iia-like nitrogen regulatory protein ptsn | E0E99_04590 | Not Available | Positive | 937049 - 937540 | 17825.4 |
| rnase adapter rapz | E0E99_04595 | Not Available | Positive | 937586 - 938440 | 32538.2 |
| pts phosphocarrier protein npr | E0E99_04600 | Not Available | Positive | 938437 - 938709 | 9780.73 |
| monofunctional biosynthetic peptidoglycan transglycosylase | E0E99_04605 | Not Available | Negative | 938840 - 939559 | 26786.5 |
| isoprenoid biosynthesis glyoxalase elbb | E0E99_04610 | Not Available | Negative | 939556 - 940209 | 22920.8 |
| aerobic respiration two-component sensor histidine kinase arcb | E0E99_04615 | Not Available | Negative | 940439 - 942775 | 87973.1 |
| tigr01212 family radical sam protein | E0E99_04620 | Not Available | Negative | 942981 - 943910 | 34484.3 |
| glutamate synthase large subunit | E0E99_04625 | Not Available | Positive | 944595 - 949055 | 163221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

