Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | E0E99_04480 | Not Available | Positive | 919524 - 920957 | 51644.2 |
| obg family gtpase cgta | E0E99_04485 | Not Available | Negative | 921063 - 922235 | 43196.3 |
| dmt family transporter | E0E99_04490 | Not Available | Negative | 922251 - 923216 | 34905.2 |
| 50s ribosomal protein l27 | E0E99_04495 | Not Available | Negative | 923344 - 923601 | 9097.04 |
| 50s ribosomal protein l21 | E0E99_04500 | Not Available | Negative | 923621 - 923932 | 11551.0 |
| octaprenyl diphosphate synthase | E0E99_04505 | Not Available | Positive | 924191 - 925162 | 35355.3 |
| dna-binding transcriptional regulator sfsb | E0E99_04510 | Not Available | Positive | 925385 - 925669 | 10811.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | E0E99_04515 | Not Available | Negative | 925726 - 926985 | 44779.2 |
| bola family iron metabolism protein ibag | E0E99_04520 | Not Available | Negative | 927039 - 927293 | 9454.33 |
| lipid asymmetry maintenance protein mlab | E0E99_04525 | Not Available | Negative | 927463 - 927756 | 10690.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

