Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | E0E99_04425 | Not Available | Negative | 909589 - 910482 | 34282.5 |
| beta-aspartyl-peptidase | E0E99_04430 | Not Available | Positive | 910631 - 911764 | 39911.6 |
| c4-dicarboxylate abc transporter | E0E99_04435 | Not Available | Positive | 911775 - 913241 | 51802.5 |
| phosphoglucosamine mutase | E0E99_04440 | Not Available | Negative | 913286 - 914623 | 47541.5 |
| dihydropteroate synthase | E0E99_04445 | Not Available | Negative | 914616 - 915464 | 30695.1 |
| atp-dependent zinc metalloprotease ftsh | E0E99_04450 | Not Available | Negative | 915563 - 917497 | 70710.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | E0E99_04455 | Not Available | Negative | 917597 - 918226 | 23246.3 |
| ribosome assembly rna-binding protein yhby | E0E99_04460 | Not Available | Positive | 918352 - 918645 | 10801.4 |
| hypothetical protein | E0E99_04465 | Not Available | Positive | 918672 - 918854 | 6664.43 |
| transcription elongation factor grea | E0E99_04470 | Not Available | Negative | 918799 - 919275 | 17681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

