Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta | E0E99_04065 | Not Available | Positive | 839916 - 840824 | 33073.6 |
| citrate lyase subunit alpha | E0E99_04070 | Not Available | Positive | 840834 - 842366 | 55000.5 |
| citrate lyase holo-[acyl-carrier protein] synthase | E0E99_04075 | Not Available | Positive | 842370 - 842924 | 20238.3 |
| triphosphoribosyl-dephospho-coa synthase | E0E99_04080 | Not Available | Positive | 842893 - 843798 | 32978.7 |
| citrate/succinate antiporter citt | E0E99_04085 | Not Available | Positive | 843824 - 845287 | 52869.6 |
| ribonuclease i | E0E99_04090 | Not Available | Positive | 845398 - 846204 | 29520.9 |
| flavin reductase family protein | E0E99_04095 | Not Available | Negative | 846246 - 846869 | 22786.8 |
| alpha/beta hydrolase | E0E99_04100 | Not Available | Negative | 846966 - 847796 | 30464.0 |
| hypothetical protein | E0E99_04105 | Not Available | Positive | 848076 - 848321 | 9246.1 |
| 50s rrna methyltransferase | E0E99_04110 | Not Available | Positive | 848355 - 848591 | 8257.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

