Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobalamin/alpha-ribazole phosphatase | E0E99_03965 | Not Available | Positive | 821706 - 822317 | 23221.6 |
| ribosome silencing factor | E0E99_03970 | Not Available | Positive | 822572 - 822889 | 11639.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E0E99_03975 | Not Available | Positive | 822893 - 823360 | 17372.1 |
| penicillin-binding protein 2 | E0E99_03980 | Not Available | Positive | 823391 - 825292 | 70795.6 |
| rod shape-determining protein roda | E0E99_03985 | Not Available | Positive | 825295 - 826407 | 40537.6 |
| endolytic peptidoglycan transglycosylase rlpa | E0E99_03990 | Not Available | Positive | 826418 - 827527 | 38126.9 |
| serine-type d-ala-d-ala carboxypeptidase | E0E99_03995 | Not Available | Positive | 827670 - 828881 | 44413.4 |
| duf493 family protein | E0E99_04000 | Not Available | Positive | 828988 - 829251 | 9786.82 |
| lipoyl(octanoyl) transferase lipb | E0E99_04005 | Not Available | Positive | 829366 - 830007 | 23725.7 |
| lipoyl synthase | E0E99_04010 | Not Available | Positive | 830214 - 831179 | 35923.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

