Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-NCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1298235 bp
Thymine Count
1310387 bp
Guanine Count
1400987 bp
Cytosine Count
1385082 bp
Genome Length
5394691 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
283 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | E0E99_03915 | Not Available | Positive | 811664 - 812404 | 27431.1 |
| glutamate/aspartate abc transporter permease gltk | E0E99_03920 | Not Available | Positive | 812404 - 813078 | 24843.1 |
| amino acid abc transporter atp-binding protein | E0E99_03925 | Not Available | Positive | 813078 - 813803 | 26720.8 |
| pyrimidine-specific ribonucleoside hydrolase riha | E0E99_03930 | Not Available | Positive | 813920 - 814855 | 34036.1 |
| zinc ribbon-containing protein | E0E99_03935 | Not Available | Negative | 814952 - 815434 | 18727.1 |
| leucine--trna ligase | E0E99_03940 | Not Available | Positive | 815670 - 818252 | 97268.9 |
| lps assembly lipoprotein lpte | E0E99_03945 | Not Available | Positive | 818267 - 818866 | 21400.7 |
| dna polymerase iii subunit delta | E0E99_03950 | Not Available | Positive | 818866 - 819897 | 38574.7 |
| nicotinate-nucleotide adenylyltransferase | E0E99_03955 | Not Available | Positive | 819899 - 820540 | 24442.3 |
| threonine-phosphate decarboxylase | E0E99_03960 | Not Available | Negative | 820515 - 821609 | 40880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

