Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter substrate-binding protein btuf | E0F20_03640 | Not Available | Negative | 743220 - 744020 | 29083.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | E0F20_03645 | Not Available | Negative | 744013 - 744711 | 24303.4 |
| dgtpase | E0F20_03650 | Not Available | Positive | 744795 - 746312 | 59397.0 |
| serine endoprotease degp | E0F20_03655 | Not Available | Positive | 746442 - 747875 | 49450.6 |
| cdar family transcriptional regulator | E0F20_03660 | Not Available | Positive | 748023 - 749180 | 43669.2 |
| duf3461 family protein | E0F20_03665 | Not Available | Negative | 749268 - 749654 | 15083.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | E0F20_03670 | Not Available | Negative | 749764 - 750588 | 29878.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | E0F20_03675 | Not Available | Negative | 750620 - 753292 | 102488.0 |
| type i methionyl aminopeptidase | E0F20_03680 | Not Available | Negative | 753406 - 754200 | 29212.3 |
| 30s ribosomal protein s2 | E0F20_03685 | Not Available | Positive | 754525 - 755250 | 26818.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

