Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly lipoprotein lpte | E0F20_03485 | Not Available | Positive | 712193 - 712792 | 21400.7 |
| dna polymerase iii subunit delta | E0F20_03490 | Not Available | Positive | 712792 - 713823 | 38574.7 |
| nicotinate-nucleotide adenylyltransferase | E0F20_03495 | Not Available | Positive | 713825 - 714466 | 24442.3 |
| threonine-phosphate decarboxylase | E0F20_03500 | Not Available | Negative | 714441 - 715535 | 40880.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | E0F20_03505 | Not Available | Positive | 715632 - 716243 | 23221.6 |
| ribosome silencing factor | E0F20_03510 | Not Available | Positive | 716498 - 716815 | 11639.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E0F20_03515 | Not Available | Positive | 716819 - 717286 | 17372.1 |
| penicillin-binding protein 2 | E0F20_03520 | Not Available | Positive | 717317 - 719218 | 70795.6 |
| rod shape-determining protein roda | E0F20_03525 | Not Available | Positive | 719221 - 720333 | 40537.6 |
| endolytic peptidoglycan transglycosylase rlpa | E0F20_03530 | Not Available | Positive | 720344 - 721453 | 38126.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

