Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator dagr | E0F20_02245 | Not Available | Positive | 450326 - 453124 | 104799.0 |
| pts sugar transporter subunit iia | E0F20_02250 | Not Available | Positive | 453245 - 453670 | 15155.4 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | E0F20_02255 | Not Available | Positive | 453683 - 454168 | 17615.3 |
| pts sugar transporter subunit iic | E0F20_02260 | Not Available | Positive | 454194 - 454943 | 26773.9 |
| pts system mannose/fructose/sorbose family transporter subunit iid | E0F20_02265 | Not Available | Positive | 454943 - 455800 | 30705.3 |
| d-glucosaminate-6-phosphate ammonia lyase | E0F20_02270 | Not Available | Positive | 455804 - 456913 | 39479.4 |
| 2-dehydro-3-deoxy-phosphogluconate aldolase | E0F20_02275 | Not Available | Positive | 456900 - 457643 | 25863.1 |
| rpn family recombination-promoting nuclease/putative transposase | E0F20_02280 | Not Available | Positive | 457855 - 458769 | 34593.8 |
| lipoprotein nlpa | E0F20_02285 | Not Available | Positive | 458894 - 459712 | 29457.4 |
| dmt family transporter | E0F20_02290 | Not Available | Negative | 459741 - 460643 | 32213.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

