Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E0F20_02045 | Not Available | Negative | 411248 - 412612 | 49138.6 |
| membrane protein insertase yidc | E0F20_02050 | Not Available | Negative | 412718 - 414364 | 61577.3 |
| membrane protein insertion efficiency factor yidd | E0F20_02055 | Not Available | Negative | 414367 - 414624 | 9371.57 |
| ribonuclease p protein component | E0F20_02060 | Not Available | Negative | 414588 - 414947 | 13785.1 |
| 50s ribosomal protein l34 | E0F20_02065 | Not Available | Negative | 414965 - 415105 | 5409.74 |
| chromosomal replication initiator protein dnaa | E0F20_02070 | Not Available | Positive | 415712 - 417115 | 52763.2 |
| dna polymerase iii subunit beta | E0F20_02075 | Not Available | Positive | 417120 - 418220 | 40557.0 |
| dna replication/repair protein recf | E0F20_02080 | Not Available | Positive | 418220 - 419293 | 40487.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | E0F20_02085 | Not Available | Positive | 419322 - 421736 | 89585.6 |
| sugar-phosphatase | E0F20_02090 | Not Available | Positive | 421943 - 422755 | 29589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

