Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | E0F20_26625 | Not Available | Positive | 5307732 - 5307806 | 2724.26 |
| hypothetical protein | E0F20_26635 | Not Available | Positive | 5308340 - 5308978 | 23530.1 |
| cytochrome b/b6 domain-containing protein | E0F20_26640 | Not Available | Positive | 5309558 - 5310130 | 21526.6 |
| lexa family transcriptional regulator | E0F20_26655 | Not Available | Positive | 5310869 - 5311258 | 14349.0 |
| Trna-pseudo | Not Available | Not Available | Positive | 5311389 - 5311468 | Not Available |
| peptide transporter | E0F20_26660 | Not Available | Negative | 5311496 - 5312500 | 37753.2 |
| para family protein | E0F20_26665 | Not Available | Negative | 5312497 - 5312683 | 6721.95 |
| is3 family transposase | E0F20_26670 | Not Available | Positive | 5312755 - 5313881 | 43297.1 |
| is30-like element iscfr4 family transposase | E0F20_26675 | Not Available | Negative | 5313920 - 5315080 | 44419.4 |
| dna recombinase | E0F20_26680 | Not Available | Positive | 5315151 - 5316356 | 44578.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

