Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase | E0F20_26395 | Not Available | Negative | 5271232 - 5272454 | 46477.0 |
| dna helicase | E0F20_26400 | Not Available | Negative | 5272455 - 5273950 | 56191.4 |
| uroporphyrinogen-iii c-methyltransferase | E0F20_26405 | Not Available | Positive | 5274344 - 5275132 | 28384.6 |
| arac family transcriptional regulator | E0F20_26410 | Not Available | Negative | 5275111 - 5275519 | 15831.8 |
| transposase | E0F20_26415 | Not Available | Positive | 5275520 - 5275587 | 2250.54 |
| hypothetical protein | E0F20_26425 | Not Available | Positive | 5276202 - 5276393 | 6877.34 |
| hypothetical protein | E0F20_26430 | Not Available | Positive | 5276668 - 5277050 | 14492.4 |
| hypothetical protein | E0F20_26435 | Not Available | Positive | 5277363 - 5277710 | 12890.5 |
| type vi secretion system tube protein hcp | E0F20_26440 | Not Available | Positive | 5277713 - 5278192 | 17446.9 |
| reverse transcriptase | E0F20_26445 | Not Available | Negative | 5278748 - 5279515 | 29044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

